PriceLab/TReNA: Fit transcriptional regulatory networks using gene expression, priors, machine learning

Methods for reconstructing transcriptional regulatory networks, especially in species for which genome-wide TF binding site information is available.

Getting started

Package details

AuthorSeth Ament <[email protected]>, Paul Shannon <[email protected]>, Matthew Richards <[email protected]>
Bioconductor views FeatureExtraction GeneExpression GeneRegulation NetworkInference Regression SystemsBiology Transcription
MaintainerPaul Shannon <[email protected]>
LicenseGPL-3
Version1.7.14
URL https://pricelab.github.io/trena/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("PriceLab/TReNA")
PriceLab/TReNA documentation built on Nov. 20, 2019, 10:49 p.m.