PriceLab/TReNA: Fit transcriptional regulatory networks using gene expression, priors, machine learning

Methods for reconstructing transcriptional regulatory networks, especially in species for which genome-wide TF binding site information is available.

Getting started

Package details

AuthorSeth Ament <seth.ament@systemsbiology.org>, Paul Shannon <pshannon@systemsbioloyg.org>, Matthew Richards <mrichard@systemsbiology.org>
Bioconductor views FeatureExtraction GeneExpression GeneRegulation NetworkInference Regression SystemsBiology Transcription
MaintainerPaul Shannon <paul.thurmond.shannon@gmail.com>
LicenseGPL-3
Version1.11.5
URL https://pricelab.github.io/trena/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("PriceLab/TReNA")
PriceLab/TReNA documentation built on Aug. 30, 2020, 12:39 p.m.