Man pages for PriceLab/trenaSGM
trenaSGM: trena single gene model
| allKnownTFs | specify the universe of recognized transcription factor gene... |
| build | create regulatory model of the gene, following all the... |
| calculate | create regulatory model of the gene, following all the... |
| execute.footprint.strategy | build a model based on the specified footprint strategy |
| FootprintDatabaseModelBuilder-class | Create a FootprintDatabaseModelBuilder object |
| ModelBuilder-class | Constructor for ModelBuilder |
| NoDnaModelBuilder-class | Create a NoDnaModelBuilder object |
| printf | provide formatted console output as in the standard C library |
| RegionsMotifMatchingModelBuilder-class | Create a RegionsMotifMatchingModelBuilder object |
| roundNumericColumns | truncate precision in data.frames |
| show | summarize the attributes specifying the creation of a trena... |
| staged.build | create regulatory model of the gene, following all the... |
| summarizeModels | summarize the gene regulatory models preciously calculated by... |
| trenaSGM-class | Create a trenaSGM object |
| trimModel | trim an expansive model to a more credible one, using... |
