estimateMedianLogicle: Estimates a common logicle transformation for a flowSet.
In RGLab/flowCore: flowCore: Basic structures for flow cytometry data
View source: R/median-logicle-transform.R
estimateMedianLogicle R Documentation
Estimates a common logicle transformation for a flowSet.
Description
Of the negative values for each channel specified, the median of the specified
quantiles are used.
Usage
estimateMedianLogicle(flow_set, channels, m = 4.5, q = 0.05)
Arguments
flow_set
object of class 'flowSet'
channels
character vector of channels to transform
m
TODO – default value from .lgclTrans
q
quantile
Value
TODO
RGLab/flowCore documentation built on Aug. 26, 2024, 8:52 a.m.
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View source: R/median-logicle-transform.R
| estimateMedianLogicle | R Documentation |
Estimates a common logicle transformation for a flowSet.
Description
Of the negative values for each channel specified, the median of the specified quantiles are used.
Usage
estimateMedianLogicle(flow_set, channels, m = 4.5, q = 0.05)
Arguments
flow_set |
object of class 'flowSet' |
channels |
character vector of channels to transform |
m |
TODO – default value from .lgclTrans |
q |
quantile |
Value
TODO
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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