hcIndex: A function for computing the Higher-Criticism index

In RGLab/flowReMix: Generalized Linear Modeling of FCM Data With Clustered Coefficients

Description

Computes the Higher-Critcism index, computes a p-value via a permutation and conducts model averaging through bootstrap.

Usage

hcIndex(fit, groups = "all", target, direction = c("two.sided", "less",
  "greater"), a0 = 0.75, nPermutations = 1000, nBootstrap = 200,
  plus = TRUE, innovated = FALSE, scale = FALSE, verbose = TRUE)

Arguments

fit	a object of class 'flowReMix'
groups	the groups for which the HC index should be computed. By default, the function constructs an HC index based on all cell-subsets.
target	a factor variable with two levels for which a classifier will be constructed
a0	Only the top a0 in the HC index

RGLab/flowReMix documentation built on May 8, 2019, 5:55 a.m.