openCyto-deprecated: Deprecated functions in package 'openCyto'.

In RGLab/openCyto: Hierarchical Gating Pipeline for flow cytometry data

Deprecated functions in package openCyto.

Description

add_pop –> gs_add_gating_method

add_pop_init –> gs_add_gating_method_init

prior_flowClust –> prior_flowclust

templateGen –> gh_generate_template

gate_flowClust_1d –> gate_flowclust_1d

gate_flowClust_2d –> gate_flowclust_2d

quantileGate –> gate_quantile

quadGate.seq –> gate_quad_sequential

quadGate.tmix –> gate_quad_tmix

gating –> gt_gating

getNodes –> gt_get_nodes

getChildren –> gt_get_children

getParent –> gt_get_parent

getGate –> gt_get_gate

listgtMethods –> gt_list_methods

registerPlugins –> register_plugins

remove_pop –> gs_remove_gating_method

toggle.helperGates –> gt_toggle_helpergates

get.helperGates –> gt_get_helpergates

delete.helperGates –> gt_delete_helpergates

RGLab/openCyto documentation built on Nov. 7, 2024, 9:23 p.m.