openCyto.options: Some global options for openCyto See examples for the meaning...
In RGLab/openCyto: Hierarchical Gating Pipeline for flow cytometry data
openCyto.options R Documentation
Some global options for openCyto
See examples for the meaning of these options and how to get/set them.
Description
Get/set some global options for openCyto
Examples
opt <- getOption("openCyto")
#the threshold of minimum cell events required for the gating algorithm to proceed
opt[["gating"]][["minEvents"]]
#to change the threshold
opt[["gating"]][["minEvents"]] <- 100
options(openCyto = opt)
#switch off the validity check flags(Not recommended)
opt[["check.pop"]] <- FALSE
options(openCyto = opt)
RGLab/openCyto documentation built on Aug. 23, 2023, 6:53 a.m.
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| openCyto.options | R Documentation |
Some global options for openCyto See examples for the meaning of these options and how to get/set them.
Description
Get/set some global options for openCyto
Examples
opt <- getOption("openCyto")
#the threshold of minimum cell events required for the gating algorithm to proceed
opt[["gating"]][["minEvents"]]
#to change the threshold
opt[["gating"]][["minEvents"]] <- 100
options(openCyto = opt)
#switch off the validity check flags(Not recommended)
opt[["check.pop"]] <- FALSE
options(openCyto = opt)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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