RaikOtto/artdeco: Alikeness Based on Regression on Transciptome DECOnvolution
This packages determines the similarity cancer sample transcriptomes to samples with known differentiation stage. Training data input are healthy training scRNA samples and either RNA-seq Bulk or microarray data. The output is an estimate of the input's similarity to pre-trained differentiated stages.
Getting started
Browse package contents
Package details |
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| Bioconductor views | GeneExpression Microarray RNASeq Regression Sequencing SupportVectorMachine |
| Maintainer | |
| License | Artistic-2.0 |
| Version | 1.0.3 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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