identify_marker_genes: identify_marker_genes

In RaikOtto/artdeco: Alikeness Based on Regression on Transciptome DECOnvolution

Description

identify_marker_genes

Usage

identify_marker_genes(
  expression_training_mat,
  subtype_vector,
  subtype,
  training_nr_marker_genes
)

Arguments

expression_training_mat	Matrix that contains the expression data.
subtype_vector	Vector containing the subtype of the training samples.
subtype	Subtype for which to determine the differentially expressed.
training_nr_marker_genes	Number of desired marker genes to describe a subtype.

Value

Returns marker genes

RaikOtto/artdeco documentation built on Nov. 3, 2021, 6:18 p.m.