FDOMIndices: Generic functions for commonly used FDOM indices

In RichardLaBrie/paRafac_correction: Corrects EEM all at once before using Matlab for PARAFAC

Generic functions for commonly used FDOM indices

Description

This is a warp up function to calculate freshness index, FI, BIX and HIX based on the output of PARAFAC.cube.design()

Usage

FDOMIndices(cube, cor = T, rel = F)

Arguments

cube	is the output of PARAFAC.cube.design()
cor	is a logical argument for instruments corrections applied to EEMs. Default is TRUE
rel	is a logical argument to scale the values of HIX

References

Fluorescence index (FI) from McKnight et al (2001) and Cory and McKnight (2005)

Freshness index from Parlanti et al. (2000)

Humification index (HIX) from Ohno et al (2002)

Biological index (BIX) from Huguet et al (2009)

RichardLaBrie/paRafac_correction documentation built on March 13, 2023, 2:11 p.m.