read.EEM: Reads CSV file of EEMs produced by the Cary Eclipe...

In RichardLaBrie/paRafac_correction: Corrects EEM all at once before using Matlab for PARAFAC

Reads CSV file of EEMs produced by the Cary Eclipe fluorometer

Description

This function reads a CSV file produced by the Cary Eclipe fluorometer

Usage

read.EEM(
  filename,
  excitation = c(220, 450, 5),
  emission = c(230, 600, 2),
  EMCOL = FALSE,
  samplepercsv = 1,
  split = "_",
  dot.number = 1,
  fluorometer = "Cary Eclipse",
  EEMskip,
  data.file = "data",
  subfolder
)

Arguments

excitation	is a vector of three variables of the scanning setup (min, max, interval). Default is c(220, 450, 5)
emission	is a vector of three variables of the scanning setup (min, max, interval). Default is c(230, 600, 2)
EMCOL	is a logical parameter indicating whether or not the emission are stored as column in the csv file. Default is FALSE.
samplepercsv	is a parameter which indicates the number of sample
split	is a parameter to define the symbol between your samples name if samplepercsv > 1. Default is "_"
dot.number	is a paramater for the number of . in CDOM file name. Default is 1 (.txt or .csv)
fluorometer	is a paramater for the fluorometer model. Default is "Cary Eclipse". Other model supported: "Shimadzu"
EEMskip	is a parameter to skip lines in EEM file before data. Default is 1

See Also

plot.EEM.go

RichardLaBrie/paRafac_correction documentation built on March 13, 2023, 2:11 p.m.