examples/mcmc-Effloglog.R

In Roche/crmPack: Object-Oriented Implementation of CRM Designs

# nolint start
##obtain mcmc efficacy samples given the data, 'Effloglog' model (efficacy model) and
## mcmc simulations options data must be of 'DataDual' class
data<-DataDual(x=c(25,50,25,50,75,300,250,150),
              y=c(0,0,0,0,0,1,1,0),
              w=c(0.31,0.42,0.59,0.45,0.6,0.7,0.6,0.52),
              doseGrid=seq(25,300,25),placebo=FALSE)
## model must be of 'Effloglog' class
Effmodel<-Effloglog(eff=c(1.223,2.513),eff_dose=c(25,300),nu=c(a=1,b=0.025),data=data)

## options must be ''McmcOptions' class
options<-McmcOptions(burnin=100,step=2,samples=200)
set.seed(94)
samples<-mcmc(data=data,model=Effmodel,options=options)
# nolint end