bamVarNamePicker: Get variable name per filepath in experiment

In Roleren/ORFik: Open Reading Frames in Genomics

Get variable name per filepath in experiment

Description

Get variable name per filepath in experiment

Usage

bamVarNamePicker(
  df,
  skip.replicate = FALSE,
  skip.condition = FALSE,
  skip.stage = FALSE,
  skip.fraction = FALSE,
  skip.experiment = FALSE,
  skip.libtype = FALSE,
  fraction_prepend_f = TRUE
)

Arguments

df	an ORFik experiment
skip.replicate	a logical (FALSE), don't include replicate in variable name.
skip.condition	a logical (FALSE), don't include condition in variable name.
skip.stage	a logical (FALSE), don't include stage in variable name.
skip.fraction	a logical (FALSE), don't include fraction
skip.experiment	a logical (FALSE), don't include experiment
skip.libtype	a logical (FALSE), don't include libtype
fraction_prepend_f	a logical (TRUE), include "f" in front of fraction, useful for knowing what fraction is.

Value

variable name of library (character vector)

Roleren/ORFik documentation built on Nov. 13, 2024, 10 p.m.