get_umap_embedding_adjust_umap: ScaleFactor

In RuzhangZhao/savis: Single-cell rna-seq Adaptive VISualization (SAVIS)

ScaleFactor

Description

Combined PC embedding with scale factor for subPC

Usage

get_umap_embedding_adjust_umap(
  pca_embedding,
  pca_center,
  pca_anchor_index,
  pca_dist,
  umap_embedding,
  N_label_,
  cluster_,
  label_index_,
  main_index = NULL,
  pca_dist_main = NULL,
  distance_metric = "euclidean",
  scale_factor = 0.9,
  rotate = TRUE,
  seed.use = 42
)

Examples

a<-1

RuzhangZhao/savis documentation built on June 30, 2023, 10:48 p.m.