compareBiasCorr: compareBiasCorr

In SOLV-Code/RapidRicker: Rapid spawner-recruit data quality checks and sensitivity tests of standard biological benchmarks.

compareBiasCorr

Description

This function generates a summary of raw and bias-corrected values for SR parameters and resulting biological benchmarks, using different approaches for implementing the bias correction.

Usage

compareBiasCorr(bm_obj, sr.scale)

Arguments

bm	bm_obj output from calcMCMCRickerBM.

Value

a data frame with 1 column for each parameter (ln.a,Seq,Smsy,Sgen) and different versions in rows. Versions include: deterministic estimate with and without bias correction. Mean estimate of MCMC posteriors with (1) no bias correction, (2) bias correction using mean ln.a and mean sigma, and (3) bias correction applied to each MCMC sample and then calculate the mean. Median estimate and perentiles of MCMC posteriors with (1) no bias correction, (2) bias correction applied to each MCMC sample.

SOLV-Code/RapidRicker documentation built on Jan. 14, 2025, 9:36 a.m.