API for SRenan/XCIR
Estimating inactivated X chromosome expression

Global functions
BB Source code
CMH Man page Source code
GOI Man page Source code
MM Source code
MM2 Source code
MM3 Source code
XCIR Man page
XCIR-package Man page
addAnno Man page Source code
back_sel Source code
betaAB Man page Source code
betaBinomXI Man page Source code
betaMC Man page Source code
betaMV Man page Source code
betaParam Source code
check_model Source code
dbb Source code
fisherCombine Man page Source code
getAI Source code Source code
getError Man page Source code
getGenicAll Source code
getGenicDP Man page Source code
getGenicMostExp Source code
getSkewedSamples Source code
getZ Source code
get_status Source code
ldbb Source code
logL_BB Source code
logL_MM Source code
logL_MM2 Source code
logL_MM3 Source code
makeDTFromGeno Source code Source code
newCalls Source code
pbb Source code
perm2_test Source code
perm3_test Source code
perm_test Man page Source code
plotBBCellFrac Man page Source code
plotQC Source code
plot_errors Source code
plot_escape_fraction Source code
plot_status Man page Source code
plot_status_fraction Man page Source code
print_cmh Source code
readPhenotypes Source code
readRNASNPs Man page Source code
readVCF4 Source code
readXCI Man page Source code
readXVcf Man page Source code
read_AD_format Source code
sample_clean Source code
seqm_anno Source code
summescape Man page Source code
write_siteRef Source code
xcir_clean Source code
SRenan/XCIR documentation built on Oct. 31, 2018, 4:31 p.m.