annotates_snps: Annotate

Description Usage Arguments

View source: R/annotate.R

Description

Find SNPs based on matching position in dbgap using biomaRt

Usage

1
annotates_snps(object, pos_col = "POS", chr = "X")

Arguments

object

A data.table with genomic positions. Typically, the table returned by betaBinomXI.

pos_col

A character indicating the column that contains genomic positions.

chr

A character. Filter SNPs for the selected chromosome.


SRenan/XCIR documentation built on Oct. 8, 2021, 3:11 a.m.