aggregate_taxa: Aggregate taxa on a given taxonomic rank
In SWittouck/tidyamplicons: Functions to Manipulate and Visualize Amplicon Abundance Data
aggregate_taxa R Documentation
Aggregate taxa on a given taxonomic rank
Description
There are two ways to call this function:
Usage
aggregate_taxa(ta, rank = NULL)
Arguments
ta
a tidyamplicons object
rank
an optional rank to aggregate on
Details
* If the rank you are interested in is in the standard list, just supply it
as an argument.
* If not, delete all taxon variables except taxon_id and the ranks you are
still interested in prior to calling this function.
SWittouck/tidyamplicons documentation built on Aug. 15, 2023, 3:14 a.m.
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| aggregate_taxa | R Documentation |
Aggregate taxa on a given taxonomic rank
Description
There are two ways to call this function:
Usage
aggregate_taxa(ta, rank = NULL)
Arguments
ta |
a tidyamplicons object |
rank |
an optional rank to aggregate on |
Details
* If the rank you are interested in is in the standard list, just supply it as an argument. * If not, delete all taxon variables except taxon_id and the ranks you are still interested in prior to calling this function.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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