Files in Sage-Bionetworks/SageBionetworksCoex
Gene Coexpression
DESCRIPTION
NAMESPACE
R/checkVersion.R
R/clusterGenes.R
R/computeClusterCoefficient.R
R/computeModuleCC.R
R/computeModuleLinks.R
R/corHeatmap.R
R/createDiagnosticPlots.R
R/createNetwork.R
R/cutree2.R
R/intraModularStatistics.R
R/mergeClusterByPCA.R
R/moduleDetectLabel.R
R/moduleHubProfiles.R
R/modulesFromGeneTree.R
R/openImgDev.R
R/performCoexFromFiles.R
R/performCoexpressionAnalysis.R
R/spaceTime.R
R/tomHeatmap.R
data/expressionData.txt
inst/doc/vignette.Rnw
man/SageBionetworksCoex-internal.Rd
man/SageBionetworksCoex-package.Rd
man/clusterGenes.Rd
man/corHeatmap.Rd
man/createDiagnosticPlots.Rd
man/createNetwork.Rd
man/expressionData.Rd
man/intraModularStatistics.Rd
man/modulesFromGeneTree.Rd
man/performCoexFromFiles.Rd
man/performCoexpressionAnalysis.Rd
man/tomHeatmap.Rd
src/Makevars.win
src/R_init_SageBionetworksCoex.c
src/dsyrk.c
src/dsyrk.h
tests/testCoexAnalysis.R
tests/testComputeClusterCoefficients.R
tests/testEdgeCases.R
