API for Sage-Bionetworks/snm
Supervised Normalization of Microarrays
| Global functions | |
|---|---|
| buildBasisFunction | Man page Man page |
| buildBasisSplineMatrix | Man page Man page |
| calcArrayEffects | Man page Man page |
| calcSig | Man page |
| calculate.nulls | Man page Man page |
| checkArguments | Man page Man page |
| construct.normalized.data | Man page |
| edge.fit | Man page Man page |
| edge.glr | Man page Man page |
| edge.qvalue | Man page Man page |
| err.msg | Man page Man page |
| estimateDifferentialExpression | Man page |
| f.pvalue | Man page |
| fit.fast.model | Man page Man page |
| fit.model | Man page Man page |
| fit.pset | Man page |
| fitted.snm | Man page |
| get.coefs | Man page |
| get.resids | Man page |
| getSpanningSet | Man page Man page |
| make.ref.model.matrices | Man page Man page |
| make.snm.obj | Man page Man page |
| makeDataObject | Man page Man page |
| plot.snm | Man page |
| remove.adjustment.vars | Man page |
| rm.zero.cols | Man page Man page |
| sim.doubleChannel | Man page |
| sim.function.var | Man page Man page |
| sim.intensity.dep | Man page Man page |
| sim.preProcessed | Man page |
| sim.probe.specific | Man page Man page |
| sim.refDesign | Man page |
| sim.singleChannel | Man page |
| snm | Man page |
| snm.diagnostic.plot | Man page Man page |
| snm.fitted | Man page |
| snm.plot | Man page |
| snm.summary | Man page |
| summary.snm | Man page |
| sva | Man page |
