calculate.nulls: Calculate the Identity of the Null Probes Identify Null...

Description Usage Arguments Author(s) Examples

Description

Returns null probes given p -values and pi0 estimate.

Usage

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calculate.nulls(pvals, pi0)

Arguments

pvals

Vector of P values

pi0

Pi0 of P values

Author(s)

Brig Mecham <brig.mecham@sagebase.org> and John D. Storey <jstorey@princeton.edu>

Examples

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##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function(pvals, pi0) {
  which(rank(pvals) > (1-pi0)*length(pvals))
  }

Sage-Bionetworks/snm documentation built on May 9, 2019, 12:14 p.m.