Files in Scavetta/complexomics
Complexome Profiling Analysis package
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/allPeptidesPlot.R
R/assignClusters.R
R/cleanData.R
R/clusterComp.R
R/compranApp.R
R/exportClusterAssignments.R
R/extractRepPeps.R
R/getNormTable.R
R/globals.R
R/groupHeatMap.R
R/makeBarPlotClusterSummary.R
R/makeDist.R
R/normTableForExport.R
R/normTableWideToLong.R
R/normalizeTable.R
R/oneGroupTwoLabelsCoMigration.R
R/onlyInOneLabelState.R
R/peptideImport.R
R/pickPeptide.R
R/protImportForAnalysis.R
R/proteinPlot.R
R/simplifyProteins.R
R/splitModLab.R
R/toFilter.R
R/twoGroupsWithinLabelCoMigration.R
R/uncenteredCor.R
README.md
inst/CITATION
inst/extData/data.txt
inst/extData/dataNormProts.txt
inst/extData/exampleGroup.txt
inst/shinyApps/ComPrAn/app_components/body.R
inst/shinyApps/ComPrAn/app_components/header.R
inst/shinyApps/ComPrAn/app_components/sidebar.R
inst/shinyApps/ComPrAn/global.R
inst/shinyApps/ComPrAn/server.R
inst/shinyApps/ComPrAn/ui.R
man/allPeptidesPlot.Rd
man/assignClusters.Rd
man/cleanData.Rd
man/clusterComp.Rd
man/compranApp.Rd
man/exportClusterAssignments.Rd
man/extractRepPeps.Rd
man/getNormTable.Rd
man/groupHeatMap.Rd
man/makeBarPlotClusterSummary.Rd
man/makeDist.Rd
man/normTableForExport.Rd
man/normTableWideToLong.Rd
man/normalizeTable.Rd
man/oneGroupTwoLabelsCoMigration.Rd
man/onlyInOneLabelState.Rd
man/peptideImport.Rd
man/pickPeptide.Rd
man/protImportForAnalysis.Rd
man/proteinPlot.Rd
man/simplifyProteins.Rd
man/splitModLab.Rd
man/toFilter.Rd
man/twoGroupsWithinLabelCoMigration.Rd
man/uncenteredCor.Rd
tests/testthat.R
tests/testthat/test-proteinPlot.R
vignettes/PackageWorkflow_small.png
vignettes/SILACcomplexomics.Rmd
vignettes/fileFormats.rmd
vignettes/normProtInput.png
vignettes/normalizeA.png
vignettes/normalizeB.png
vignettes/peptideInputFile.png
vignettes/pickPeptideA.png
vignettes/pickPeptideB.png
vignettes/proteinWorkflow.Rmd
