Man pages for SchlossLab/mothuR
Schloss Lab Tools for Reproducible Microbiome Research
| calc_relabun | Calculate OTU relative abundances from a shared file |
| close_enough | Check whether two numeric vectors are close enough |
| format_number | Format human-readable numbers. |
| get_wildcards_tbl | Get the Snakemake wildcards as a tibble |
| inline_hook | Inline hook for knitr to paste human-readable numbers and... |
| is_nearly_whole | Checks whether a number is near to a whole number |
| is_nondesc | Check whether all elements given are sorted in non-descending... |
| load_deps | Install & load packages |
| log_snakemake | Save output, messages, warnings, and errors to the Snakemake... |
| parse_tax | Convert taxonomy strings into dataframe of labels based on... |
| paste_oxford_list | Create a prose string from a list or vector |
| pool_taxon_counts | Pool OTU counts at a particular taxonomic level |
| read_dist | Read in lower left triangular matrix from file |
| read_tax | Read in a taxonomy file and parse it to a wide dataframe |
| reexports | dplyr pipe |
| schtools-package | schtools: Schloss Lab Tools for Reproducible Microbiome... |
| set_knitr_opts | Set knitr chunk options & inline hook |
| theme_lucas | Sarah's go-to theme for ggplot2 |
| theme_sovacool | Kelly's go-to theme for ggplot2 |
