cluster_reads: Cluster reads based on methylation
In Shians/NanoMethViz: Visualise methylation data from Oxford Nanopore sequencing
View source: R/cluster_reads.R
cluster_reads R Documentation
Cluster reads based on methylation
Description
Cluster reads based on methylation
Usage
cluster_reads(x, chr, start, end, min_pts = 5)
Arguments
x
a ModBamResult object.
chr
the chromosome name where to find the region.
start
the start position of the region.
end
the end position of the region.
min_pts
the minimum number of points needed to form a cluster (default = 10).
Value
A tibble with information about each read's cluster assignment and read statistics.
Shians/NanoMethViz documentation built on Dec. 17, 2024, 8:56 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/cluster_reads.R
| cluster_reads | R Documentation |
Cluster reads based on methylation
Description
Cluster reads based on methylation
Usage
cluster_reads(x, chr, start, end, min_pts = 5)
Arguments
x |
a ModBamResult object. |
chr |
the chromosome name where to find the region. |
start |
the start position of the region. |
end |
the end position of the region. |
min_pts |
the minimum number of points needed to form a cluster (default = 10). |
Value
A tibble with information about each read's cluster assignment and read statistics.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.