convert_methy_format: Convert methylation calls to NanoMethViz format

In Shians/NanoMethViz: Visualise methylation data from Oxford Nanopore sequencing

Convert methylation calls to NanoMethViz format

Description

Convert methylation calls to NanoMethViz format

Usage

convert_methy_format(
  input_files,
  output_file,
  samples = fs::path_ext_remove(fs::path_file(input_files)),
  verbose = TRUE
)

Arguments

input_files	the files to convert
output_file	the output file to write results to (must end in .bgz)
samples	the names of samples corresponding to each file
verbose	TRUE if progress messages are to be printed

Value

invisibly returns the output file path, creates a tabix file (.bgz) and its index (.bgz.tbi)

Shians/NanoMethViz documentation built on June 8, 2024, 10:48 p.m.