compute_redundancy: Compute redundancy score for each term.
In SimonLarsen/higana: Ontology-based analysis of genetic variants.
Description
Usage
Arguments
Value
Description
The score is defined as the maximum Jaccard index between the annotations of a term and the annotations of its children.
Usage
1
Arguments
o
An annotated ontology object.
Value
A numeric vector of Jaccard index values (between 0 and 1) for each term.
Terms for which the score is not defined (e.g. terms with no children or no annotations) will have an NA value.
SimonLarsen/higana documentation built on April 24, 2020, 7:29 a.m.
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Description Usage Arguments Value
Description
The score is defined as the maximum Jaccard index between the annotations of a term and the annotations of its children.
Usage
1 |
Arguments
o |
An annotated |
Value
A numeric vector of Jaccard index values (between 0 and 1) for each term.
Terms for which the score is not defined (e.g. terms with no children or no annotations) will have an NA value.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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