API for SimonSchafferer/short-ncrna-annotation
Non-coding RNA annotation package

Global functions
EnsemblAnnotation Man page Man page Man page
EnsemblAnnotation-class Man page
GRangesBasedAnnotation Man page
GRangesBasedAnnotation-class Man page
NcbiBlastAnnotation Man page
NcbiBlastAnnotation-class Man page
RangedAnnotation Man page
RangedAnnotation-class Man page
RefSeqUCSCAnnotation Man page
RefSeqUCSCAnnotation-class Man page
SequenceBasedAnnotation-class Man page
annotName Man page
annotName,RangedAnnotation-method Man page
annotName,SequenceBasedAnnotation-method Man page
annotationGR Man page
annotationGR,RangedAnnotation-method Man page
annotationL Man page
annotationL,SequenceBasedAnnotation-method Man page
annotationMap Man page
annotationMap,RangedAnnotation-method Man page
annotationSummary Man page
annotationSummary,EnsemblAnnotation-method Man page
annotationSummary,GRangesBasedAnnotation-method Man page
annotationSummary,NcbiBlastAnnotation-method Man page
annotationSummary,RefSeqUCSCAnnotation-method Man page
calculateAlignmentCoverageTwoGRanges Man page
convertRangesToDF Man page
convertRangesToDF,EnsemblAnnotation-method Man page
convertRangesToDF,GRanges-method Man page
convertRangesToDF,GRangesBasedAnnotation-method Man page
convertRangesToDF,RangedAnnotation-method Man page
convertRangesToDF,RefSeqUCSCAnnotation-method Man page
createRObject_gtf Man page
executeAnnotation Man page
executeAnnotation,NcbiBlastAnnotation-method Man page
feature_annotation_Function_ensembl Man page
feature_annotation_Function_gr Man page
getAnnotationByID Man page
getAnnotationByID,RangedAnnotation-method Man page
getFlatTable Man page
getFlatTable,EnsemblAnnotation-method Man page
getFlatTable,GRangesBasedAnnotation-method Man page
getFlatTable,RefSeqUCSCAnnotation-method Man page
importRangedAnnotation Man page
importRangedAnnotation, Man page
importRangedAnnotation,EnsemblAnnotation-method Man page
importRangedAnnotation,GRangesBasedAnnotation-method Man page
importRangedAnnotation,RefSeqUCSCAnnotation-method Man page
initialize,RangedAnnotation-method Man page
initialize,SequenceBasedAnnotation-method Man page
inputGR Man page
inputGR,RangedAnnotation-method Man page
loadLibraryGloballyAs Man page
loadLibraryLocallyAs Man page
protein_coding_AnnotationFunction_ensembl Man page
SimonSchafferer/short-ncrna-annotation documentation built on May 9, 2019, 1:45 p.m.