initialize-RangedAnnotation-method: Initialisation method for Ranged Annotation class

In SimonSchafferer/short-ncrna-annotation: Non-coding RNA annotation package

Description

Initialisation method for Ranged Annotation class

Usage

## S4 method for signature 'RangedAnnotation'
initialize(.Object, annotName, pathToFile,
  filename, queryGR, ...)

Arguments

.Object	EnsemblAnnotation, RefSeqUCSCAnnotation, GRangesBasedAnnotation
annotName	Name of the annotation
pathToFile	file path to either an RObject or specific file type see "rtracklayer" of the subject annotation
queryGR	GRanges object of candidates one wants to annotate
...	data to include in the new object. Named arguments correspond to slots in the class definition. Unnamed arguments must be objects from classes that this class extends.

SimonSchafferer/short-ncrna-annotation documentation built on May 9, 2019, 1:45 p.m.