check.geneid: check compatibility of gene identifiers between eQTL set and...
In StanleyXu/egquery: Loci2path: regulatory annotation of genomic intervals based on tissue-specific expression QTLs
Description
Usage
Arguments
Value
Examples
Description
This function perform enrichment test between one eQTL set and one gene set
Usage
1
check.geneid(e.set, g.set)
Arguments
e.set
an eqtlSet object; the eQTL set to be queried against
g.set
an object of geneSet class; the gene set to be tested
Value
a data.frame shows the number of genes from
(1) eqtl Set (2) gene Set (3) shared
Examples
1
check.geneid(eset.list$Skin, biocarta)
StanleyXu/egquery documentation built on Sept. 12, 2019, 9:35 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
This function perform enrichment test between one eQTL set and one gene set
Usage
1 | check.geneid(e.set, g.set)
|
Arguments
e.set |
an eqtlSet object; the eQTL set to be queried against |
g.set |
an object of geneSet class; the gene set to be tested |
Value
a data.frame shows the number of genes from
(1) eqtl Set (2) gene Set (3) shared
Examples
1 | check.geneid(eset.list$Skin, biocarta)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.