boxplot_taxon: Make boxplot of taxon abundance stratified by one sample...
In TBrach/MicrobiomeX: eXtended Functions for Microbiome Analysis and Visualization
Description
Usage
Arguments
Value
Examples
Description
Make boxplot of taxon abundance stratified by one sample metadata item.
Usage
1
boxplot_taxon(physeq, taxon = NULL, group = NULL)
Arguments
physeq
Phyloseq object.
taxon
Name of taxon whose abundance should be drawn.
group
Metadata column to stratify.
Value
ggplot object.
Examples
1
2
3
4
## Not run:
boxplot_taxon(physeq, taxon="Prevotella", group="Enterotype")
## End(Not run)
TBrach/MicrobiomeX documentation built on May 14, 2019, 2:28 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Make boxplot of taxon abundance stratified by one sample metadata item.
Usage
1 | boxplot_taxon(physeq, taxon = NULL, group = NULL)
|
Arguments
physeq |
Phyloseq object. |
taxon |
Name of taxon whose abundance should be drawn. |
group |
Metadata column to stratify. |
Value
ggplot object.
Examples
1 2 3 4 | ## Not run:
boxplot_taxon(physeq, taxon="Prevotella", group="Enterotype")
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.