visualisation_plot: Expectation and Variance Visualisation

Description Usage Arguments Examples

View source: R/diagnostics.R

Description

Plots the points of a wave as a pairs plot, coloured by emulator expectation (lower) and variance (upper) for each output.

Usage

1
visualisation_plot(ems, input_points, output_names)

Arguments

ems

The list of emulators

input_points

The points on which to evaluate the emulators

output_names

The list of outputs

Examples

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
ranges <- list(aSI = c(0.1, 0.8), aIR = c(0, 0.5), aSR = c(0, 0.05))
targets <- list(
 list(val = 281, sigma = 10.43),
 list(val = 30, sigma = 11.16),
 list(val = 689, sigma = 14.32)
)
outputs <- c('nS','nI','nR')
ems <- emulator_from_data(GillespieSIR, outputs, ranges, deltas = rep(0.1, 3))
t_ems <- purrr::map(seq_along(ems), ~ems[[.]]$adjust(GillespieSIR, outputs[[.]]))
visualisation_plot(t_ems, GillespieSIR, outputs)

Tandethsquire/emulatorr documentation built on April 12, 2021, 1:08 a.m.