Matrix2colCorrelation: Get ordered column correlation matrix from input dataframe....
In Tong-Chen/YSX: For Yishengxin Training
Description
Usage
Arguments
Value
Examples
Description
Get ordered column correlation matrix from input dataframe. Normally used
to do sample corealtion of gene expression or OTU abundance matrix.
Usage
1
Matrix2colCorrelation(mat, method = "pearson", digits = 4, cor_file = NULL)
Arguments
mat
A dataframe.
method
Type of correlation coefficient given to cor.
Default "pearson".
digits
Number of decimial digits (given to round) to keep (default 4).
cor_file
Save ordered correlation matrix to given file name.
Value
A list containing ordered column correlation matrix and hcluster result.
Examples
1
2
Tong-Chen/YSX documentation built on Jan. 25, 2021, 2:49 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Get ordered column correlation matrix from input dataframe. Normally used to do sample corealtion of gene expression or OTU abundance matrix.
Usage
1 | Matrix2colCorrelation(mat, method = "pearson", digits = 4, cor_file = NULL)
|
Arguments
mat |
A dataframe. |
method |
Type of correlation coefficient given to |
digits |
Number of decimial digits (given to |
cor_file |
Save ordered correlation matrix to given file name. |
Value
A list containing ordered column correlation matrix and hcluster result.
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.