normalizedExpr2DistribBoxplot: Plot distribution of normalzied expression to check the...
In Tong-Chen/YSX: For Yishengxin Training
Description
Usage
Arguments
Value
Examples
View source: R/transcriptome.R
Description
Plot distribution of normalzied expression to check the normalization effect of DESeq2.
Usage
1
normalizedExpr2DistribBoxplot(normexpr, saveplot = NULL, ...)
Arguments
normexpr
A list returned by deseq2normalizedExpr.
saveplot
Save plot to given file "a.pdf", "b.png".
...
Additional parameters given to ggsave.
Value
A ggplot2 object
Examples
1
2
normexpr <- deseq2normalizedExpr(dds)
normalizedExpr2DistribBoxplo(normexpr)
Tong-Chen/YSX documentation built on Jan. 25, 2021, 2:49 a.m.
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Description Usage Arguments Value Examples
View source: R/transcriptome.R
Description
Plot distribution of normalzied expression to check the normalization effect of DESeq2.
Usage
1 | normalizedExpr2DistribBoxplot(normexpr, saveplot = NULL, ...)
|
Arguments
normexpr |
A list returned by |
saveplot |
Save plot to given file "a.pdf", "b.png". |
... |
Additional parameters given to |
Value
A ggplot2 object
Examples
1 2 | normexpr <- deseq2normalizedExpr(dds)
normalizedExpr2DistribBoxplo(normexpr)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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