Files in UBod/podkat
Position-Dependent Kernel Association Test

.gitignore
DESCRIPTION
NAMESPACE
R/AllClasses.R R/AllGenerics.R R/access-methods.R R/assocTest-methods.R R/c-methods.R R/coerce-methods.R R/computeKernel.R R/computePvalues.R R/computeWeights.R R/filterResult-methods.R R/genotypeMatrix-methods.R R/inputChecks.R R/nullModel-methods.R R/p.adjust-methods.R R/partitionRegions-methods.R R/plot-methods.R R/print-methods.R R/qqplot-methods.R R/readGenotypeMatrix-methods.R R/readRegionsFromBedFile.R R/readSampleNamesFromVcfHeader.R R/readVariantInfo-methods.R R/resampling.R R/show-methods.R R/sort-methods.R R/split-methods.R R/summary-methods.R R/unmaskedRegions.R R/weightFuncs.R R/weights-methods.R README.md
data/b36Unmasked.RData
data/b37Unmasked.RData
data/hg18Unmasked.RData
data/hg19Unmasked.RData
data/hg38Unmasked.RData
data/hgA.RData
inst/CITATION
inst/COPYRIGHT
inst/NEWS
inst/examples/HBA.bed
inst/examples/example1.vcf.gz
inst/examples/example1.vcf.gz.tbi
inst/examples/example1lin.csv
inst/examples/example1log.csv
man/AssocTestResult-class.Rd man/AssocTestResultRanges-class.Rd man/GenotypeMatrix-class.Rd man/NullModel-class.Rd man/VariantInfo-class.Rd man/assocTest-methods.Rd man/computeKernel.Rd man/filterResult-methods.Rd man/genotypeMatrix-methods.Rd man/hgA.Rd man/nullModel-methods.Rd man/p.adjust-methods.Rd man/partitionRegions-methods.Rd man/plot-methods.Rd man/podkat-package.Rd man/print-methods.Rd man/qqplot-methods.Rd man/readGenotypeMatrix-methods.Rd man/readRegionsFromBedFile.Rd man/readSampleNamesFromVcfHeader.Rd man/readVariantInfo-methods.Rd man/sort-methods.Rd man/split-methods.Rd man/unmasked-datasets.Rd man/unmaskedRegions.Rd man/weightFuncs.Rd man/weights-methods.Rd
src/Makevars
src/Makevars.win
src/R_init_podkat.cpp
src/bernoulliExact.cpp
src/bernoulliExact.h
src/checkAndFixGenotype.cpp
src/checkAndFixGenotype.h
src/cumMax.cpp
src/cumMax.h
src/doubleMale.cpp
src/doubleMale.h
src/errCodes.h
src/kernels.cpp
src/kernels.h
src/pValues.cpp
src/pValues.h
src/partitionRegions.cpp
src/partitionRegions.h
src/qfc.cpp
src/qfc.h
src/readGenotypeMatrix.cpp
src/readGenotypeMatrix.h
src/readVariantInfo.cpp
src/readVariantInfo.h
vignettes/JKU_EN_noName.pdf vignettes/PODKAT_example.pdf vignettes/PODKAT_workflow.pdf vignettes/PosKernel.pdf vignettes/SKAT_example.pdf vignettes/betaWeights.pdf
vignettes/bioinf-article.txi
vignettes/bioinf-bar.png
vignettes/bioinf.cls
vignettes/invSdWeights.pdf vignettes/logisticWeights.pdf
vignettes/podkat.Rnw
UBod/podkat documentation built on May 16, 2018, 12:24 a.m.