USCbiostats/HiLDA: Conducting statistical inference on comparing the mutational exposures of mutational signatures by using hierarchical latent Dirichlet allocation
A package built under the Bayesian framework of applying hierarchical latent Dirichlet allocation. It statistically tests whether the mutational exposures of mutational signatures (Shiraishi-model signatures) are different between two groups. The package also provides inference and visualization.
Getting started
Browse package contents
Package details |
|
|---|---|
| Bioconductor views | Bayesian Sequencing Software SomaticMutation StatisticalMethod |
| Maintainer | |
| License | GPL-3 |
| Version | 1.7.6 |
| URL | https://github.com/USCbiostats/HiLDA https://doi.org/10.1101/577452 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
|
