get_XtX: Get transformed statistics: XtX
In USCbiostats/hJAM: Hierarchical Joint Analysis of Marginal Summary Statistics
View source: R/mJAM_helper_chrX.R
View source: R/mJAM_helper.R
get_XtX R Documentation
Get transformed statistics: XtX
Description
To calculate sufficient statistics based on summary statistics
To calculate sufficient statistics based on summary statistics
Usage
get_XtX(N_outcome, Gl, maf)
get_XtX(N_outcome, Gl, maf)
Arguments
N_outcome
Sample size in the GWAS where we obtained 'betas'
Gl
A matrix of reference dosage, columns are SNPs and rows are individuals.
maf
A vector of minor allele frequencies
Value
a variance covariance matrix of scaled Gl
a variance covariance matrix of scaled Gl
USCbiostats/hJAM documentation built on Jan. 26, 2024, 5:27 p.m.
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View source: R/mJAM_helper_chrX.R View source: R/mJAM_helper.R
| get_XtX | R Documentation |
Get transformed statistics: XtX
Description
To calculate sufficient statistics based on summary statistics
To calculate sufficient statistics based on summary statistics
Usage
get_XtX(N_outcome, Gl, maf)
get_XtX(N_outcome, Gl, maf)
Arguments
N_outcome |
Sample size in the GWAS where we obtained 'betas' |
Gl |
A matrix of reference dosage, columns are SNPs and rows are individuals. |
maf |
A vector of minor allele frequencies |
Value
a variance covariance matrix of scaled Gl
a variance covariance matrix of scaled Gl
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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