aphylo-info: Information about 'aphylo' and 'multiAphylo' objects

In USCbiostats/phylogenetic: Statistical Inference and Prediction of Annotations in Phylogenetic Trees

Information about aphylo and multiAphylo objects

Description

Information about annotations, in particular, number of annotations (Nann), number of annotated leaves (Nannotated), number of unnanotated leaves (Nunannotated), and number of trees (Ntrees).

Usage

Nann(phy)

Nannotated(phy)

Ntrees(phy)

Arguments

phy	Either an object of class aphylo, multiAphylo, or aphylo_estimates.

Value

If phy is of class aphylo, then a single scalar. otherwise, if phy is of class multiAphylo

See Also

Other information: ape-methods

Examples

# Generating data for the example
set.seed(223)
dat <- rmultiAphylo(10, n = 5, P = 2)
Nann(dat)
Nannotated(dat)
Ntrees(dat)

USCbiostats/phylogenetic documentation built on Oct. 28, 2023, 7:23 a.m.