read_pli: Read PLI files from SIFTER
In USCbiostats/phylogenetic: Statistical Inference and Prediction of Annotations in Phylogenetic Trees
read_pli R Documentation
Read PLI files from SIFTER
Description
Read PLI files from SIFTER
Usage
read_pli(fn, dropNAs = TRUE)
Arguments
fn
Full path to the file
dropNAs
Logical scalar. When TRUE, the function will discard any
protein that has no annotations.
Value
A data table object including the following columns:
name: Used to match UniProtKB data and GOA,
number,
go: A list of the GO annotations
moc: Evidence code
fam: Name of the family
See Also
Other reading:
panther-tree,
read_nhx()
USCbiostats/phylogenetic documentation built on Oct. 28, 2023, 7:23 a.m.
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| read_pli | R Documentation |
Read PLI files from SIFTER
Description
Read PLI files from SIFTER
Usage
read_pli(fn, dropNAs = TRUE)
Arguments
fn |
Full path to the file |
dropNAs |
Logical scalar. When |
Value
A data table object including the following columns:
name: Used to match UniProtKB data and GOA,
number,
go: A list of the GO annotations
moc: Evidence code
fam: Name of the family
See Also
Other reading:
panther-tree,
read_nhx()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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