aphylo-methods | R Documentation |
aphylo
objectsPlot and print methods for aphylo
objects
## S3 method for class 'aphylo'
plot(
x,
y = NULL,
prop = 0.15,
node.type.col = c(dupl = "black", other = "gray"),
node.type.size = c(dupl = 0, other = 0),
rect.args = list(),
as_ci = NULL,
...
)
x |
An object of class |
y |
Ignored. |
prop |
Numeric scalar between 0 and 1. Proportion of the device that the
annotations use in |
node.type.col, node.type.size |
Vectors of length 2. In the case of
|
rect.args |
List of arguments passed to graphics::rect. |
as_ci |
Integer vector. Internal use only. |
... |
Further arguments passed to ape::plot.phylo. |
The plot.aphylo
function is a wrapper of ape::plot.phylo.
In the case of plot.aphylo
, NULL
.
Other aphylo methods:
aphylo-class
set.seed(7172)
atree <- raphylo(20)
plot(atree)
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