tests/testthat/test-sensorreadingsummary.R
In USGS-R/repgen: USGS internal report generation
context("sensorreadingsummary tests")
wd <- getwd()
setwd(dir = tempdir())
context("testing sensorreading")
test_that("sensorreading examples work",{
library(jsonlite)
reportObject <- fromJSON(system.file('extdata','sensorreadingsummary','sensorReadingSummary-example.json', package = 'repgen'))
expect_is(repgen:::sensorreadingsummary(reportObject, 'Author Name'), 'character')
reportObject2 <- fromJSON(system.file('extdata','sensorreadingsummary','sensorReadingSummary-example-exc-comm.json', package = 'repgen'))
expect_is(repgen:::sensorreadingsummary(reportObject2, 'Author Name'), 'character')
reportObject3 <- fromJSON(system.file('extdata','sensorreadingsummary','sensorReadingSummary-example_w_quals.json', package = 'repgen'))
expect_is(repgen:::sensorreadingsummary(reportObject3, 'Author Name'), 'character')
})
test_that('parseSRSQualifiers properly retrieves the qualifiers', {
library(jsonlite)
timezone <- "Etc/GMT+5"
qualsJson <- fromJSON('{
"readings": [{
"displayTime": "2016-02-29T05:57:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.24",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.24",
"qualifiers": [
{
"startTime": "2017-03-05T18:45:00-05:00",
"endTime": "2017-03-06T05:45:00.0000001-05:00",
"identifier": "EQUIP",
"user": "system",
"dateApplied": "2017-03-11T14:57:13.4625975Z"
},
{
"startTime": "2017-02-26T01:30:00-05:00",
"endTime": "2017-02-26T01:30:00.0000001-05:00",
"identifier": "EQUIP",
"user": "system",
"dateApplied": "2017-03-11T14:57:13.4625975Z"
}
]
}],
"reportMetadata": {
"qualifierMetadata": {
"EQUIP": {
"identifier": "EQUIP",
"code": "EQP",
"displayName": "Equipment malfunction"
}
}
}
}')
#browser()
qualsMetadata <- repgen:::fetchQualifierMetadata(qualsJson)
reading <- qualsJson[["readings"]][1,]
quals <- repgen:::parseSRSQualifiers(reading, timezone, qualsMetadata)
expect_is(quals, 'data.frame')
expect_equal(nrow(quals), 2)
expect_equal(quals[1,][['startTime']], flexibleTimeParse('2017-03-05T18:45:00-05:00', timezone))
expect_equal(quals[1,][['endTime']], flexibleTimeParse("2017-03-06T05:45:00.0000001-05:00", timezone))
expect_equal(quals[1,][['identifier']], "EQUIP")
expect_equal(quals[1,][['code']], "EQP")
})
test_that("get unique qualifiers", {
library(jsonlite)
library(dplyr)
reportObject <- fromJSON('{
"readings": [
{
"displayTime": "2016-02-29T05:57:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.24",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.24",
"qualifiers": [
{
"startDate": "2016-02-29T05:54:41.0000000Z",
"endDate": "2016-02-29T15:54:41.0000000Z",
"identifier": "ESTIMATED",
"appliedBy": "admin",
"dateApplied": "2016-03-01T16:35:14.0000000Z"
}
],
"nearestCorrectedTime": "2016-02-29T06:00:00.0000000Z",
"nearestRawTime": "2016-02-29T06:00:00.0000000Z",
"nearestRawValue": "5.24"
},
{
"displayTime": "2016-02-29T07:31:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.21",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.19",
"qualifiers": [
{
"startDate": "2016-02-29T11:54:41.0000000Z",
"endDate": "2016-02-29T15:54:41.0000000Z",
"identifier": "ESTIMATED",
"appliedBy": "admin",
"dateApplied": "2016-03-01T07:35:14.0000000Z"
}
],
"nearestCorrectedTime": "2016-02-29T07:45:00.0000000Z",
"nearestRawTime": "2016-02-29T07:45:00.0000000Z",
"nearestRawValue": "5.19"
}
],
"reportMetadata": {
"requestParameters": {
"excludeComments": "",
"primaryTimeseriesIdentifier": "3ec1f3f59fe944079fc0ea5a4eb03e83",
"startDate": "2015-11-01",
"endDate": "2016-11-14",
"requestPeriod": {}
},
"requestingUser": "thongsav",
"endDate": "2016-11-14T23:59:59.999999999Z",
"timezone": "Etc/GMT+5",
"title": "Sensor Reading Summary",
"stationName": "Sandy River near Madrid, Maine",
"stationId": "01047200",
"excludeComments": false,
"timeSeriesParams": "Gage height",
"timeSeriesUniqueId": "3ec1f3f59fe944079fc0ea5a4eb03e83",
"timeseriesLabel": "Gage height.ft@01047200",
"startDate": "2015-11-01T00:00:00Z",
"qualifierMetadata": {
"ESTIMATED": {
"identifier": "ESTIMATED",
"code": "E",
"displayName": "Estimated"
}
}
}
}')
quals <- bind_rows(repgen:::fetchQualifierMetadata(reportObject)[[1]])
quals <- quals[, c("code", "identifier", "displayName")]
uniqueSRSQualifiers <- repgen:::formatQualifiersTable(quals)
expect_true(nrow(uniqueSRSQualifiers)==1)
})
test_that('do all expected columns exist in formatted results', {
library(jsonlite)
reportObject <- fromJSON('{
"readings": [
{
"displayTime": "2016-02-29T05:57:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.24",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.24",
"qualifiers": [
{
"startDate": "2016-02-29T05:54:41.0000000Z",
"endDate": "2016-02-29T15:54:41.0000000Z",
"identifier": "ESTIMATED",
"appliedBy": "admin",
"dateApplied": "2016-03-01T16:35:14.0000000Z"
}
],
"nearestCorrectedTime": "2016-02-29T06:00:00.0000000Z",
"nearestRawTime": "2016-02-29T06:00:00.0000000Z",
"nearestRawValue": "5.24"
},
{
"displayTime": "2016-02-29T07:31:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.21",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.19",
"qualifiers": [
{
"startDate": "2016-02-29T11:54:41.0000000Z",
"endDate": "2016-02-29T15:54:41.0000000Z",
"identifier": "ESTIMATED",
"appliedBy": "admin",
"dateApplied": "2016-03-01T16:35:14.0000000Z"
}
],
"nearestCorrectedTime": "2016-02-29T07:45:00.0000000Z",
"nearestRawTime": "2016-02-29T07:45:00.0000000Z",
"nearestRawValue": "5.19"
}
],
"reportMetadata": {
"requestParameters": {
"excludeComments": "",
"primaryTimeseriesIdentifier": "3ec1f3f59fe944079fc0ea5a4eb03e83",
"startDate": "2015-11-01",
"endDate": "2016-11-14",
"requestPeriod": {}
},
"requestingUser": "thongsav",
"endDate": "2016-11-14T23:59:59.999999999Z",
"timezone": "Etc/GMT+5",
"title": "Sensor Reading Summary",
"stationName": "Sandy River near Madrid, Maine",
"stationId": "01047200",
"timeSeriesParams": "Gage height",
"timeSeriesUniqueId": "3ec1f3f59fe944079fc0ea5a4eb03e83",
"timeseriesLabel": "Gage height.ft@01047200",
"startDate": "2015-11-01T00:00:00Z",
"qualifierMetadata": {
"ESTIMATED": {
"identifier": "ESTIMATED",
"code": "E",
"displayName": "Estimated"
}
}
}
}')
includeComments <- repgen:::isNullOrFalse(repgen:::fetchRequestParametersField(reportObject, 'excludeComments'))
timezone <- repgen:::fetchReportMetadataField(reportObject, 'timezone')
columnNames <- c("Date",
"Time",
"Party",
"Sublocation",
"Method",
"Reading Type",
"Reading",
"Uncertainty",
"Method",
"Reading Type",
"Reading",
"Uncertainty",
"Recorder w/in Uncertainty?",
"Indicated Correction",
"Applied Correction",
"Corrected w/in Reference?",
"Value",
"Time",
"Qualifier"
)
results <- repgen:::formatSensorData(reportObject[["readings"]], columnNames, includeComments,timezone, repgen:::fetchQualifierMetadata(reportObject))
expect_equal(length(results$toRet),19)
})
test_that('getUniqueComments works for removing redundant comments', {
library(jsonlite)
lastDate <- "09/29/2014"
lastComm <- "GageInspectedCode = NTRD<br/>IntakeHoleConditionCode = UNSP<br/>VentHoleConditionCode = UNSP; OrificeServicedCode = PRGD<br/>OrificeServicedDateTime = 2014-09-29T07:06:00-04:00 (EDT)<br/>DesiccantConditionCode = DESG<br/>DesiccantChangedIndicator = false<br/>GasSystemTypeCode = BAIR<br/>GasTankChangedIndicator = false<br/>Comment = No change noticed from purge. // AF offset 1.580 // AL offset 1.570, reset at -0.01 @ 0708, based on trends and applied correction since June 2013.<br/>"
date <- "09/29/2014"
comments <- "GageInspectedCode = NTRD<br/>IntakeHoleConditionCode = UNSP<br/>VentHoleConditionCode = UNSP; OrificeServicedCode = PRGD<br/>OrificeServicedDateTime = 2014-09-29T07:06:00-04:00 (EDT)<br/>DesiccantConditionCode = DESG<br/>DesiccantChangedIndicator = false<br/>GasSystemTypeCode = BAIR<br/>GasTankChangedIndicator = false<br/>Comment = No change noticed from purge. // AF offset 1.580 // AL offset 1.570, reset at -0.01 @ 0708, based on trends and applied correction since June 2013.<br/>"
lastRefComm <- "Comment = AF RP1 4.046 - 0.160 WS 3.886 // AL - 0.170 WS 3.876<br/>"
selectedComm <- repgen:::getUniqueComments(comments, date, lastDate, lastComm)
expect_equal(selectedComm,"")
})
test_that('getUniqueComments works for non-redundant comments', {
library(jsonlite)
lastDate <- "09/29/2014"
lastComm <- "GageInspectedCode = NTRD<br/>IntakeHoleConditionCode = UNSP<br/>VentHoleConditionCode = UNSP; OrificeServicedCode = PRGD<br/>OrificeServicedDateTime = 2014-09-29T07:06:00-04:00 (EDT)<br/>DesiccantConditionCode = DESG<br/>DesiccantChangedIndicator = false<br/>GasSystemTypeCode = BAIR<br/>GasTankChangedIndicator = false<br/>Comment = No change noticed from purge. // AF offset 1.580 // AL offset 1.570, reset at -0.01 @ 0708, based on trends and applied correction since June 2013.<br/>"
date <- "09/29/2014"
comments <- "Test<br/>Test<br/>Test<br/>"
selectedComm <- repgen:::getUniqueComments(comments, date, lastDate, lastComm)
expect_equal(selectedComm,"Test<br/>Test<br/>Test<br/>")
})
test_that('recorder uncertainty function works as expected, delivers No', {
recorderValue <- "6.23"
uncertainty <- "0.05"
value <- "6.42"
recorderWithin <- repgen:::getRecorderWithinUncertainty(uncertainty, value, recorderValue)
expect_equal(recorderWithin,"No")
})
test_that('recorder uncertainty function works as expected, delivers Yes', {
recorderValue <- "6.44"
uncertainty <- "0.05"
value <- "6.42"
recorderWithin <- repgen:::getRecorderWithinUncertainty(uncertainty, value, recorderValue)
expect_equal(recorderWithin,"Yes")
})
test_that('indicated correction returns correctly',{
recorderValue <- "6.44"
value <- "6.42"
indicatedCorrection <- repgen:::getIndicatedCorrection(recorderValue, value)
expect_equal(indicatedCorrection,as.numeric("-0.02"))
})
test_that('applied correction returns as expected', {
raw <- "5.02"
corrected <- "5.02"
appliedCorrection <- repgen:::getAppliedCorrection(raw, corrected)
expect_equal(appliedCorrection,as.numeric("0"))
})
test_that('get Corrected reference returns value as expected', {
nearestCorrectedValue <- "2.48"
uncertainty <- "0.01"
value <- "2.48"
correctedRef <- repgen:::getCorrectedRef(value, nearestCorrectedValue, uncertainty)
expect_equal(correctedRef,"Yes")
})
setwd(dir = wd)
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context("sensorreadingsummary tests")
wd <- getwd()
setwd(dir = tempdir())
context("testing sensorreading")
test_that("sensorreading examples work",{
library(jsonlite)
reportObject <- fromJSON(system.file('extdata','sensorreadingsummary','sensorReadingSummary-example.json', package = 'repgen'))
expect_is(repgen:::sensorreadingsummary(reportObject, 'Author Name'), 'character')
reportObject2 <- fromJSON(system.file('extdata','sensorreadingsummary','sensorReadingSummary-example-exc-comm.json', package = 'repgen'))
expect_is(repgen:::sensorreadingsummary(reportObject2, 'Author Name'), 'character')
reportObject3 <- fromJSON(system.file('extdata','sensorreadingsummary','sensorReadingSummary-example_w_quals.json', package = 'repgen'))
expect_is(repgen:::sensorreadingsummary(reportObject3, 'Author Name'), 'character')
})
test_that('parseSRSQualifiers properly retrieves the qualifiers', {
library(jsonlite)
timezone <- "Etc/GMT+5"
qualsJson <- fromJSON('{
"readings": [{
"displayTime": "2016-02-29T05:57:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.24",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.24",
"qualifiers": [
{
"startTime": "2017-03-05T18:45:00-05:00",
"endTime": "2017-03-06T05:45:00.0000001-05:00",
"identifier": "EQUIP",
"user": "system",
"dateApplied": "2017-03-11T14:57:13.4625975Z"
},
{
"startTime": "2017-02-26T01:30:00-05:00",
"endTime": "2017-02-26T01:30:00.0000001-05:00",
"identifier": "EQUIP",
"user": "system",
"dateApplied": "2017-03-11T14:57:13.4625975Z"
}
]
}],
"reportMetadata": {
"qualifierMetadata": {
"EQUIP": {
"identifier": "EQUIP",
"code": "EQP",
"displayName": "Equipment malfunction"
}
}
}
}')
#browser()
qualsMetadata <- repgen:::fetchQualifierMetadata(qualsJson)
reading <- qualsJson[["readings"]][1,]
quals <- repgen:::parseSRSQualifiers(reading, timezone, qualsMetadata)
expect_is(quals, 'data.frame')
expect_equal(nrow(quals), 2)
expect_equal(quals[1,][['startTime']], flexibleTimeParse('2017-03-05T18:45:00-05:00', timezone))
expect_equal(quals[1,][['endTime']], flexibleTimeParse("2017-03-06T05:45:00.0000001-05:00", timezone))
expect_equal(quals[1,][['identifier']], "EQUIP")
expect_equal(quals[1,][['code']], "EQP")
})
test_that("get unique qualifiers", {
library(jsonlite)
library(dplyr)
reportObject <- fromJSON('{
"readings": [
{
"displayTime": "2016-02-29T05:57:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.24",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.24",
"qualifiers": [
{
"startDate": "2016-02-29T05:54:41.0000000Z",
"endDate": "2016-02-29T15:54:41.0000000Z",
"identifier": "ESTIMATED",
"appliedBy": "admin",
"dateApplied": "2016-03-01T16:35:14.0000000Z"
}
],
"nearestCorrectedTime": "2016-02-29T06:00:00.0000000Z",
"nearestRawTime": "2016-02-29T06:00:00.0000000Z",
"nearestRawValue": "5.24"
},
{
"displayTime": "2016-02-29T07:31:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.21",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.19",
"qualifiers": [
{
"startDate": "2016-02-29T11:54:41.0000000Z",
"endDate": "2016-02-29T15:54:41.0000000Z",
"identifier": "ESTIMATED",
"appliedBy": "admin",
"dateApplied": "2016-03-01T07:35:14.0000000Z"
}
],
"nearestCorrectedTime": "2016-02-29T07:45:00.0000000Z",
"nearestRawTime": "2016-02-29T07:45:00.0000000Z",
"nearestRawValue": "5.19"
}
],
"reportMetadata": {
"requestParameters": {
"excludeComments": "",
"primaryTimeseriesIdentifier": "3ec1f3f59fe944079fc0ea5a4eb03e83",
"startDate": "2015-11-01",
"endDate": "2016-11-14",
"requestPeriod": {}
},
"requestingUser": "thongsav",
"endDate": "2016-11-14T23:59:59.999999999Z",
"timezone": "Etc/GMT+5",
"title": "Sensor Reading Summary",
"stationName": "Sandy River near Madrid, Maine",
"stationId": "01047200",
"excludeComments": false,
"timeSeriesParams": "Gage height",
"timeSeriesUniqueId": "3ec1f3f59fe944079fc0ea5a4eb03e83",
"timeseriesLabel": "Gage height.ft@01047200",
"startDate": "2015-11-01T00:00:00Z",
"qualifierMetadata": {
"ESTIMATED": {
"identifier": "ESTIMATED",
"code": "E",
"displayName": "Estimated"
}
}
}
}')
quals <- bind_rows(repgen:::fetchQualifierMetadata(reportObject)[[1]])
quals <- quals[, c("code", "identifier", "displayName")]
uniqueSRSQualifiers <- repgen:::formatQualifiersTable(quals)
expect_true(nrow(uniqueSRSQualifiers)==1)
})
test_that('do all expected columns exist in formatted results', {
library(jsonlite)
reportObject <- fromJSON('{
"readings": [
{
"displayTime": "2016-02-29T05:57:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.24",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.24",
"qualifiers": [
{
"startDate": "2016-02-29T05:54:41.0000000Z",
"endDate": "2016-02-29T15:54:41.0000000Z",
"identifier": "ESTIMATED",
"appliedBy": "admin",
"dateApplied": "2016-03-01T16:35:14.0000000Z"
}
],
"nearestCorrectedTime": "2016-02-29T06:00:00.0000000Z",
"nearestRawTime": "2016-02-29T06:00:00.0000000Z",
"nearestRawValue": "5.24"
},
{
"displayTime": "2016-02-29T07:31:00.0000000Z",
"recorderComments": [
"Comment \\u003d AF/AL offset 1.570\\r\\nOrificeServicedCode \\u003d NTSV\\r\\nDesiccantConditionCode \\u003d DESG\\r\\nDesiccantChangedIndicator \\u003d false\\r\\nGasSystemTypeCode \\u003d BAIR\\r\\nGasTankChangedIndicator \\u003d false"
],
"visitStatus": "TODO",
"recorderMethod": "Non-subm pressure transducer",
"recorderValue": "5.21",
"recorderType": "Routine",
"party": "ARC",
"nearestCorrectedValue": "5.19",
"qualifiers": [
{
"startDate": "2016-02-29T11:54:41.0000000Z",
"endDate": "2016-02-29T15:54:41.0000000Z",
"identifier": "ESTIMATED",
"appliedBy": "admin",
"dateApplied": "2016-03-01T16:35:14.0000000Z"
}
],
"nearestCorrectedTime": "2016-02-29T07:45:00.0000000Z",
"nearestRawTime": "2016-02-29T07:45:00.0000000Z",
"nearestRawValue": "5.19"
}
],
"reportMetadata": {
"requestParameters": {
"excludeComments": "",
"primaryTimeseriesIdentifier": "3ec1f3f59fe944079fc0ea5a4eb03e83",
"startDate": "2015-11-01",
"endDate": "2016-11-14",
"requestPeriod": {}
},
"requestingUser": "thongsav",
"endDate": "2016-11-14T23:59:59.999999999Z",
"timezone": "Etc/GMT+5",
"title": "Sensor Reading Summary",
"stationName": "Sandy River near Madrid, Maine",
"stationId": "01047200",
"timeSeriesParams": "Gage height",
"timeSeriesUniqueId": "3ec1f3f59fe944079fc0ea5a4eb03e83",
"timeseriesLabel": "Gage height.ft@01047200",
"startDate": "2015-11-01T00:00:00Z",
"qualifierMetadata": {
"ESTIMATED": {
"identifier": "ESTIMATED",
"code": "E",
"displayName": "Estimated"
}
}
}
}')
includeComments <- repgen:::isNullOrFalse(repgen:::fetchRequestParametersField(reportObject, 'excludeComments'))
timezone <- repgen:::fetchReportMetadataField(reportObject, 'timezone')
columnNames <- c("Date",
"Time",
"Party",
"Sublocation",
"Method",
"Reading Type",
"Reading",
"Uncertainty",
"Method",
"Reading Type",
"Reading",
"Uncertainty",
"Recorder w/in Uncertainty?",
"Indicated Correction",
"Applied Correction",
"Corrected w/in Reference?",
"Value",
"Time",
"Qualifier"
)
results <- repgen:::formatSensorData(reportObject[["readings"]], columnNames, includeComments,timezone, repgen:::fetchQualifierMetadata(reportObject))
expect_equal(length(results$toRet),19)
})
test_that('getUniqueComments works for removing redundant comments', {
library(jsonlite)
lastDate <- "09/29/2014"
lastComm <- "GageInspectedCode = NTRD<br/>IntakeHoleConditionCode = UNSP<br/>VentHoleConditionCode = UNSP; OrificeServicedCode = PRGD<br/>OrificeServicedDateTime = 2014-09-29T07:06:00-04:00 (EDT)<br/>DesiccantConditionCode = DESG<br/>DesiccantChangedIndicator = false<br/>GasSystemTypeCode = BAIR<br/>GasTankChangedIndicator = false<br/>Comment = No change noticed from purge. // AF offset 1.580 // AL offset 1.570, reset at -0.01 @ 0708, based on trends and applied correction since June 2013.<br/>"
date <- "09/29/2014"
comments <- "GageInspectedCode = NTRD<br/>IntakeHoleConditionCode = UNSP<br/>VentHoleConditionCode = UNSP; OrificeServicedCode = PRGD<br/>OrificeServicedDateTime = 2014-09-29T07:06:00-04:00 (EDT)<br/>DesiccantConditionCode = DESG<br/>DesiccantChangedIndicator = false<br/>GasSystemTypeCode = BAIR<br/>GasTankChangedIndicator = false<br/>Comment = No change noticed from purge. // AF offset 1.580 // AL offset 1.570, reset at -0.01 @ 0708, based on trends and applied correction since June 2013.<br/>"
lastRefComm <- "Comment = AF RP1 4.046 - 0.160 WS 3.886 // AL - 0.170 WS 3.876<br/>"
selectedComm <- repgen:::getUniqueComments(comments, date, lastDate, lastComm)
expect_equal(selectedComm,"")
})
test_that('getUniqueComments works for non-redundant comments', {
library(jsonlite)
lastDate <- "09/29/2014"
lastComm <- "GageInspectedCode = NTRD<br/>IntakeHoleConditionCode = UNSP<br/>VentHoleConditionCode = UNSP; OrificeServicedCode = PRGD<br/>OrificeServicedDateTime = 2014-09-29T07:06:00-04:00 (EDT)<br/>DesiccantConditionCode = DESG<br/>DesiccantChangedIndicator = false<br/>GasSystemTypeCode = BAIR<br/>GasTankChangedIndicator = false<br/>Comment = No change noticed from purge. // AF offset 1.580 // AL offset 1.570, reset at -0.01 @ 0708, based on trends and applied correction since June 2013.<br/>"
date <- "09/29/2014"
comments <- "Test<br/>Test<br/>Test<br/>"
selectedComm <- repgen:::getUniqueComments(comments, date, lastDate, lastComm)
expect_equal(selectedComm,"Test<br/>Test<br/>Test<br/>")
})
test_that('recorder uncertainty function works as expected, delivers No', {
recorderValue <- "6.23"
uncertainty <- "0.05"
value <- "6.42"
recorderWithin <- repgen:::getRecorderWithinUncertainty(uncertainty, value, recorderValue)
expect_equal(recorderWithin,"No")
})
test_that('recorder uncertainty function works as expected, delivers Yes', {
recorderValue <- "6.44"
uncertainty <- "0.05"
value <- "6.42"
recorderWithin <- repgen:::getRecorderWithinUncertainty(uncertainty, value, recorderValue)
expect_equal(recorderWithin,"Yes")
})
test_that('indicated correction returns correctly',{
recorderValue <- "6.44"
value <- "6.42"
indicatedCorrection <- repgen:::getIndicatedCorrection(recorderValue, value)
expect_equal(indicatedCorrection,as.numeric("-0.02"))
})
test_that('applied correction returns as expected', {
raw <- "5.02"
corrected <- "5.02"
appliedCorrection <- repgen:::getAppliedCorrection(raw, corrected)
expect_equal(appliedCorrection,as.numeric("0"))
})
test_that('get Corrected reference returns value as expected', {
nearestCorrectedValue <- "2.48"
uncertainty <- "0.01"
value <- "2.48"
correctedRef <- repgen:::getCorrectedRef(value, nearestCorrectedValue, uncertainty)
expect_equal(correctedRef,"Yes")
})
setwd(dir = wd)
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