USGS-R/streamMetabolizer: Models for Estimating Aquatic Photosynthesis and Respiration
streamMetabolizer uses inverse modeling to estimate aquatic photosynthesis and respiration (collectively, metabolism) from time series data on dissolved oxygen, water temperature, depth, and light. The package assists with data preparation, handles data gaps during modeling, and provides tabular and graphical reports of model outputs. Several time-honored methods are implemented along with many promising new variants that produce more accurate and precise metabolism estimates.
Getting started
Browse package contents
Package details |
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| Author | Alison P. Appling, Robert O. Hall, Jr., Maite Arroita, and Charles B. Yackulic |
| Maintainer | Alison Appling <aappling@usgs.gov> |
| License | file LICENSE |
| Version | 0.12.1 |
| URL | https://github.com/USGS-R/streamMetabolizer http://usgs-r.github.io/streamMetabolizer/ |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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