API for USGS-R/streamMetabolizer
Models for Estimating Aquatic Photosynthesis and Respiration

Global functions
.onAttach Source code
Kmodel_aggregate_day Man page Source code
Kmodel_allply Man page Source code
add_specs_class Man page Source code
bayes_1ply Man page
bayes_allply Man page
calc_DO_at_sat Source code
calc_DO_deficit Man page Source code
calc_DO_sat Man page
calc_air_pressure Man page Source code
calc_bins Man page Source code
calc_declination_angle Man page Source code
calc_depth Man page Source code
calc_hour_angle Man page Source code
calc_is_daytime Man page Source code
calc_light Man page Source code
calc_light_merged Man page Source code
calc_solar_insolation Man page Source code
calc_solar_time Man page Source code
calc_sun_rise_set Man page Source code
calc_velocity Man page Source code
calc_zenith_angle Man page Source code
compress_msgs Man page Source code
convert_PAR_to_SW Man page Source code
convert_SW_to_PAR Man page Source code
convert_UTC_to_localtime Man page Source code
convert_UTC_to_solartime Man page Source code
convert_date_to_doyhr Man page Source code
convert_doyhr_to_date Man page Source code
convert_k600_to_kGAS Man page Source code
convert_kGAS_to_k600 Man page Source code
convert_localtime_to_UTC Man page Source code
convert_solartime_to_UTC Man page Source code
create_calc_DO Man page Source code
create_calc_NLL Man page Source code
create_calc_dDOdt Man page Source code
data_metab Man page Source code
define_pkg_env Man page Source code
format_mcmc_mat_nosplit Man page
format_mcmc_mat_split Man page
get_data Man page Source code
get_data.metab_model Man page Source code
get_data_daily Man page Source code
get_data_daily.metab_model Man page Source code
get_fit Man page Source code
get_fit.metab_model Man page Source code
get_fitting_time Man page Source code
get_fitting_time.metab_model Man page Source code
get_info Man page Source code
get_info.metab_model Man page Source code
get_log Man page
get_log.metab_bayes Man page
get_mcmc Man page
get_mcmc.metab_bayes Man page
get_mcmc_data Man page
get_mcmc_data.metab_bayes Man page
get_param_names Man page Source code
get_param_names.character Man page Source code
get_param_names.metab_model Man page Source code
get_params Man page Source code
get_params.metab_Kmodel Man page Source code
get_params.metab_bayes Man page
get_params.metab_model Man page Source code
get_params.metab_sim Man page Source code
get_specs Man page Source code
get_specs.metab_model Man page Source code
get_version Man page Source code
get_version.metab_model Man page Source code
load_french_creek Man page Source code
load_french_creek_std Man page Source code
load_french_creek_std_mle Man page Source code
load_spring_creek Man page Source code
lookup_google_timezone Man page Source code
lookup_timezone Man page Source code
lookup_usgs_elevation Man page Source code
metab Man page Source code
metab_Kmodel Man page Source code
metab_Kmodel-class Man page
metab_bayes Man page Source code
metab_bayes-class Man page
metab_inputs Man page Source code
metab_mle Man page Source code
metab_mle-class Man page
metab_model Man page Source code
metab_model-class Man page
metab_model_interface Man page
metab_night Man page Source code
metab_night-class Man page
metab_night_predict_1ply Man page Source code
metab_sim Man page Source code
metab_sim-class Man page
mle_1ply Man page Source code
mm_check_mcmc_file Man page Source code
mm_check_mcmc_files Man page Source code
mm_data Man page Source code
mm_filter_dates Man page Source code
mm_filter_hours Man page Source code
mm_filter_valid_days Man page Source code
mm_generate_mcmc_file Man page Source code
mm_generate_mcmc_files Man page Source code
mm_get_timestep Man page Source code
mm_is_valid_day Man page Source code
mm_locate_filename Man page Source code
mm_model_by_ply Man page Source code
mm_model_by_ply_prototype Man page Source code
mm_name Man page Source code
mm_parse_name Man page Source code
mm_predict_DO_1ply Man page Source code
mm_predict_metab_1ply Man page Source code
mm_sd_to_ci Man page Source code
mm_valid_names Man page Source code
mm_validate_data Man page Source code
mm_validate_name Man page Source code
nightreg_1ply Man page Source code
plot_DO_preds Man page Source code
plot_distribs Man page Source code
plot_metab_preds Man page Source code
predict_DO Man page Source code
predict_DO.metab_Kmodel Man page Source code
predict_DO.metab_model Man page Source code
predict_DO.metab_night Man page Source code
predict_DO.metab_sim Man page Source code
predict_metab Man page Source code
predict_metab.metab_Kmodel Man page Source code
predict_metab.metab_bayes Man page
predict_metab.metab_model Man page Source code
prepdata_Kmodel Man page Source code
prepdata_bayes Man page
pretty_print_ddat Man page Source code
print.logs_metab Man page
print.specs Man page Source code
print_specs Man page Source code
revise Man page Source code
runstan_bayes Man page
show,metab_model-method Man page
show,specs-method Man page
sim_Kb Man page Source code
sim_get_par Man page Source code
sim_pred_Kb Man page Source code
specs Man page Source code
streamMetabolizer Man page
streamMetabolizer-deprecated Man page
streamMetabolizer-package Man page
summarize_stopwarn_msgs Man page Source code
to_degrees Man page Source code
to_radians Man page Source code
unitted_deprecate_warn Man page Source code
zz_build_docs Man page Source code
zz_tabular Man page Source code
USGS-R/streamMetabolizer documentation built on Aug. 15, 2023, 7:50 a.m.