API for UofABioinformaticsHub/rnaCleanR
Calculate strandness information of a bam file

Global functions
.calculateStrandCoverage Man page Source code
.calculateStrandNbReads Man page Source code
.concatenateAlignments Man page Source code
.getWinInSequence Man page Source code
.keptProbaWin Man page Source code
.keptReadFragment Man page Source code
.sequenceInfoInPartition Man page Source code
.summarizeHist Man page Source code
checkPairedEnd Man page Source code
filterDNA Man page Source code
getStrandFromBamFile Man page Source code
getStrandFromReadInfo Man page Source code
getWinOverlapEachIRange Man page Source code
getWinOverlapEachReadFragment Man page Source code
getWinOverlapGRanges Man page Source code
intersectWithFeature Man page Source code
plotHist Man page Source code
plotWin Man page Source code
strandCheckR Man page
strandCheckR-package Man page
UofABioinformaticsHub/rnaCleanR documentation built on July 12, 2019, 10 p.m.