Files in VEuPathDB/plot.data
Create `data.table`s of Ready to Plot Data

.Rbuildignore
.dev/.env
.dev/benchmarks.rds
.dev/helpers-microbenchmark.R .dev/microbench-bar.R .dev/microbench-bin.R .dev/microbench-box.R .dev/microbench-group.R .dev/microbench-histogram.R .dev/microbench-mosaic.R .dev/microbench-scattergl.R .dev/microbench-utils.R .dev/run-all-microbench.R
.devcontainer/devcontainer.json
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pr-commands.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
NAMESPACE
R/bin.R R/class-ContingencyTable.R R/class-CorrelationLink.R R/class-CorrelationNetwork.R R/class-KPartiteNetwork.R R/class-Link.R R/class-Network.R R/class-Node.R R/class-Partitions.R R/class-plotdata-bar.R R/class-plotdata-beeswarm.R R/class-plotdata-box.R R/class-plotdata-heatmap.R R/class-plotdata-histogram.R R/class-plotdata-line.R R/class-plotdata-map-markers.R R/class-plotdata-mosaic.R R/class-plotdata-scatter.R R/class-plotdata.R R/constructors-Node.R R/group.R R/methods-ContingencyTable.R R/methods-CorrelationLinks.R R/methods-CorrelationNetwork.R R/methods-KPartiteNetwork.R R/methods-Links.R R/methods-Network.R R/methods-Nodes.R R/panel.R R/plot.data-package.R R/utils-bin.R R/utils-json.R R/utils-pipe.R R/utils-stats.R R/utils.R README.md
codecov.yml
data/data.issue182.rda
data/data.noneComplete.rda
data/testDF.rda
man/.Rhistory
man/ContingencyTable-class.Rd man/CorrelationLink-class.Rd man/CorrelationLink.Rd man/CorrelationLinkList-class.Rd man/CorrelationLinkList.Rd man/CorrelationNetwork-class.Rd man/KPartiteNetwork-class.Rd man/Link-class.Rd man/Link.Rd man/LinkList-class.Rd man/LinkList.Rd man/Network-class.Rd man/Node-class.Rd man/Node.Rd man/NodeId-class.Rd man/NodeIdList-class.Rd man/NodeIdList.Rd man/NodeList-class.Rd man/Partition-class.Rd man/Partitions-class.Rd man/Partitions.Rd man/TwoByTwoTable-class.Rd man/adjustToViewport.Rd man/allStats.Rd man/bar.Rd man/bar.dt.Rd man/beeswarm.Rd man/beeswarm.dt.Rd man/bestFitLine.Rd man/bin.Rd man/box.Rd man/box.dt.Rd man/chiSqResults.Rd man/contingencyDT.Rd man/densityCurve.Rd man/fences.Rd man/filterToGeolocationViewport.Rd man/findBinWidth.Rd man/fishersTest.Rd man/getDuplicateLinks.Rd man/getIsolatedNodes.Rd man/getPartitionIndex.Rd man/getQuadrantValues.Rd man/heatmap.Rd man/heatmap.dt.Rd man/histogram.Rd man/histogram.dt.Rd man/lineplot.Rd man/lineplot.dt.Rd man/makePanels.Rd man/mapMarkers.Rd man/mapMarkers.dt.Rd man/mosaic.Rd man/mosaic.dt.Rd man/negPredictiveValue.Rd man/newMapMarkersPD.Rd man/oddsRatio.Rd man/orderByReferenceValues.Rd man/outliers.Rd man/pipe.Rd man/plot.data-package.Rd man/posPredictiveValue.Rd man/prevalence.Rd man/pruneCorrelationLinks.Rd man/pruneDuplicateLinks.Rd man/pruneIsolatedNodes.Rd man/pruneLinksAboveWeight.Rd man/pruneLinksBelowWeight.Rd man/pruneLinksByCorrelationCoef.Rd man/pruneLinksByPValue.Rd man/pruneLinksByPredicate.Rd man/relativeRisk.Rd man/scattergl.Rd man/scattergl.dt.Rd man/sensitivity.Rd man/smoothedMean.Rd man/specificity.Rd man/toJSON-BaseNetwork-method.Rd man/toJSON-CorrelationNetwork-method.Rd man/toJSON-KPartiteNetwork-method.Rd man/toJSON-Link-method.Rd man/toJSON-Node-method.Rd man/toJSON-Partitions-method.Rd man/writeJSON.Rd man/writeNetworkJSON.Rd tests/testthat.R tests/testthat/test-bar.R tests/testthat/test-beeswarm.R tests/testthat/test-bin.R tests/testthat/test-box.R tests/testthat/test-correlation-network.R tests/testthat/test-group.R tests/testthat/test-histogram.R tests/testthat/test-kpartite-network.R tests/testthat/test-line.R tests/testthat/test-links.R tests/testthat/test-map-markers.R tests/testthat/test-mosaic.R tests/testthat/test-network.R tests/testthat/test-nodes.R tests/testthat/test-scattergl.R tests/testthat/test-utils.R
VEuPathDB/plot.data documentation built on Feb. 20, 2025, 6:33 p.m.