Unknown-Genotype.fna: Fasta file with reads of unknown genotype

Unknown-Genotype.fnaR Documentation

Fasta file with reads of unknown genotype

Description

Fasta file with hepatitis B virus sequences of unknown genotype. This is used to illustrate the genotyping of HBV sequences with the QSutils package.

Format

Fasta file format. Each sequence starts with the symbol ">" followed by the sequence ID. Subsequent lines correspond to the nucleotide sequences or peptide sequences.

See Also

DBrule

Examples

filepath<-system.file("extdata","Unknown-Genotype.fna", package="QSutils")
lst2Geno <- ReadAmplSeqs(filepath,type="DNA")
hseq <- lst2Geno$hseq[1]
hseq

VHIRHepatiques/QSutils documentation built on April 27, 2024, 10:29 p.m.