tandem MS data

plot_FDR_map

R Documentation

Plot FDR as a function of parameters used to divide the volcano plot

Description

Plot FDR as a function of parameters used to divide the volcano plot

Usage

plot_FDR_map(
  FDR_res,
  FDR_bins = c(0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.1, 0.15, 0.2),
  xlim = c(0, 3),
  ylim = c(0, 3),
  colors = terrain.colors(length(FDR_bins) - 1)
)

Arguments

`FDR_res`	output from the function `compute_FDR_from_asymmetry()`
`FDR_bins`	FDR levels
`xlim`	x-axis plot limits
`ylim`	y-axis plot limits
`colors`	color palette. Should have `length(FDR_bins)-1` colors.