transform_gates: Transform gates coordinates and modify names of parameters.

In VoisinneG/flowR: R-shiny interface for the analysis of flow cytometry data

Description

Transform gates coordinates and modify names of parameters.

Usage

transform_gates(
  gates,
  transformation = NULL,
  pattern = "[\\<|\\>]",
  replacement = "",
  time_step = NULL
)

Arguments

gates	a named list representing the gating hierarchy.
transformation	A list of trans objects. Each element must be named after a parameter and contain the transfomation to apply for this parameter.
pattern	pattern to be replaced in the names of gate coordinates
replacement	Character string that is to replace 'pattern' in in the names of gate coordinates
time_step	value of the time step used to transform gates with the 'Time' parameter. Ignored if NULL.

VoisinneG/flowR documentation built on June 1, 2021, 6:42 p.m.