writevcf.beagle: Writes input file for beagle5
In Wedge-Oxford/battenberg: Battenberg subclonal copy number caller
writevcf.beagle R Documentation
Writes input file for beagle5
Description
This function writes a table formatted as a vcf to the drive for beagle5 to run on
Usage
writevcf.beagle(vcf, filepath, vcfversion = "4.2", genomereference = "GRCh37")
Arguments
vcf
data frame vcf-like for beagle
filepath
character string for path to the file to write on disk
vcfversion
character string for version for the vcf (default 4.2)
genomereference
character string for genome build (default GRCh37)
Author(s)
maxime.tarabichi
Wedge-Oxford/battenberg documentation built on Aug. 4, 2023, 6:27 p.m.
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| writevcf.beagle | R Documentation |
Writes input file for beagle5
Description
This function writes a table formatted as a vcf to the drive for beagle5 to run on
Usage
writevcf.beagle(vcf, filepath, vcfversion = "4.2", genomereference = "GRCh37")
Arguments
vcf |
data frame vcf-like for beagle |
filepath |
character string for path to the file to write on disk |
vcfversion |
character string for version for the vcf (default 4.2) |
genomereference |
character string for genome build (default GRCh37) |
Author(s)
maxime.tarabichi
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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