API for WuyangFF95/SynSigRun
Run Mutational Signature Analysis Software Packages Using Mutational Spectra generated by SynSigGen
| Global functions | |
|---|---|
| BestSignatureAnalyzerResult | Man page Source code |
| CopyBestSignatureAnalyzerResult | Man page Source code |
| Diff4SynDataSets | Man page Source code |
| FixSASigNames | Man page Source code |
| InstallMutationalPatterns | Man page Source code |
| InstallSignatureEstimation | Man page Source code |
| InstallSomaticSignatures | Man page Source code |
| InstallSparseSignatures | Man page Source code |
| InstallYAPSA | Man page Source code |
| InstalldecompTumor2Sig | Man page Source code |
| InstalldeconstructSigs | Man page Source code |
| InstallmSigAct | Man page Source code |
| Installmaftools | Man page Source code |
| InstallmutSignatures | Man page Source code |
| Installsigfit | Man page Source code |
| Installsigminer | Man page Source code |
| InstallsigneR | Man page Source code |
| MapSPToSASignatureNamesInExposure | Man page Source code |
| MustCreateDir | Source code |
| MutationalSignatures | Man page |
| RealExposures | Man page |
| RunMutationalPatterns | Man page Source code |
| RunMutationalPatternsAttributeOnly | Man page Source code |
| RunSignatureAnalyzerAttribution | Man page Source code |
| RunSignatureAnalyzerOnFile | Man page Source code |
| RunSignatureEstimationQPAttributeOnly | Man page Source code |
| RunSignatureEstimationSAAttributeOnly | Man page Source code |
| RunSomaticSignatures | Man page Source code |
| RunSparseSignatures | Man page Source code |
| RunYAPSAAttributeOnly | Man page Source code |
| RundecompTumor2SigAttributeOnly | Man page Source code |
| RundeconstructSigsAttributeOnly | Man page Source code |
| RunhdpLessHier | Man page Source code |
| RunmSigActAttributeOnly | Man page Source code |
| Runmaftools | Man page Source code |
| RunmutSignatures | Man page Source code |
| RunmutSignaturesAttributeOnly | Man page Source code |
| RunmutSpec | Man page Source code |
| Runsigfit | Man page Source code |
| RunsigfitAttributeOnly | Man page Source code |
| Runsigminer | Man page Source code |
| RunsigneR | Man page Source code |
| Runtcsm | Man page Source code |
| SAMultiRunOneCatalog | Man page Source code |
| SignatureAnalyzer4MatchedCatalogs | Man page Source code |
| SignatureAnalyzerOneRun | Man page Source code |
| SignatureAnalyzerPrepHyper1Secondary | Man page Source code |
| SignatureAnalyzerPrepHyper4 | Man page Source code |
| SourceSignatureAnalyzerCode | Man page Source code |
| SynSigRun | Man page |
| make.heldout.obj | Man page Source code |
| run.stm | Source code |
| sa.96.sigs | Man page |
| sa.COMPOSITE.sigs | Man page |
| sa.DBS.sigs | Man page |
| sa.ID.sigs | Man page |
| sa.all.real.exposures | Man page |
| sa.no.hyper.real.exposures | Man page |
| sp.all.real.exposures | Man page |
| sp.no.hyper.real.exposures | Man page |
| sp.sigs | Man page |
