readChrInfo: Read the ChrInfo of your data.
In XHWUlab/PolyAtailor: a toolkit for analyzing poly(A) tail length dynamics from xxx RNA-seq data
Description
Usage
Arguments
Details
Value
View source: R/funclib_polyAtailor.R
Description
readChrInfo returns the S4 format data of all the chromosome information you input.
Usage
1
Arguments
file
The path of TXT text of the HEAD information of the Sam file.
Details
You need to input the TXT text of the HEAD information of the Sam file after
the alignment, and then the function will calculate and return the name of
the chromosome, the range on the reference genome, the direction of the
sequence, etc
Value
The S4 format data of all the chromosome information.
XHWUlab/PolyAtailor documentation built on Dec. 28, 2021, 12:13 a.m.
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Description Usage Arguments Details Value
View source: R/funclib_polyAtailor.R
Description
readChrInfo returns the S4 format data of all the chromosome information you input.
Usage
1 |
Arguments
file |
The path of TXT text of the HEAD information of the Sam file. |
Details
You need to input the TXT text of the HEAD information of the Sam file after the alignment, and then the function will calculate and return the name of the chromosome, the range on the reference genome, the direction of the sequence, etc
Value
The S4 format data of all the chromosome information.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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