addTSNE: Adds a tSNE projection
In YosefLab/FastProjectR: Functional interpretation of single cell RNA-seq latent manifolds
View source: R/AnalysisFunctions.R
addTSNE R Documentation
Adds a tSNE projection
Description
Adds a tSNE projection
Usage
addTSNE(object, perplexity = 30, name = "tSNE", source = "LatentSpace")
Arguments
object
the VISION object
perplexity
parameter for tSNE
name
label to use for this projection
source
coordinates to use to compute tSNE
Choices are either "LatentSpace" (default) or "Proteins"
Value
VISION object with the projection added to @Projections slot
YosefLab/FastProjectR documentation built on Feb. 15, 2023, 6:21 a.m.
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View source: R/AnalysisFunctions.R
| addTSNE | R Documentation |
Adds a tSNE projection
Description
Adds a tSNE projection
Usage
addTSNE(object, perplexity = 30, name = "tSNE", source = "LatentSpace")
Arguments
object |
the VISION object |
perplexity |
parameter for tSNE |
name |
label to use for this projection |
source |
coordinates to use to compute tSNE Choices are either "LatentSpace" (default) or "Proteins" |
Value
VISION object with the projection added to @Projections slot
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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